Homocystinuria (HCY)



The finding of elevated methionine in a dried blood spot upon newborn screening suggests one of two metabolic defects: 1) Homocystinuria due to cystathionine β-synthase (CBS) deficiency or 2) hepatic methionine adenosyltransferase deficiency. The most likely defect is a deficiency of CBS, which causes a connective tissue disease with several manifestations. Many patients with homocystinuria have been described since the deficiency was first reported in 1962. Methionine accumulates at the beginning of a metabolic pathway that sequentially converts this amino acid to homocysteine, cystathionine and cysteine. The step in the pathway that converts homocysteine to cystathionine is catalyzed by CBS. Although it is highly elevated, homocysteine is not detected with newborn screening because of its reactive nature with many components in blood, including itself with the formation of the dimer cystine. The elevation of methionine, therefore, is used to detect this disorder in newborn screening. The incidence of CBS deficiency is about 1 in 60,000, although several investigators believe this disease is more common.


While the metabolic defect is present at birth, initial symptoms of homocystinuria usually have onset later in infancy and childhood. Developmental delay may be the first sign and is a harbinger of intellectual disability, but is not obligate. An early and distinctive finding is dislocation of the lens of the eye (ectopia lentis). Patients are at high risk for developing thromboembolism that may occur at any age. These may lead to stroke, seizures, permanent neurologic sequela and death. Increased clotting ability makes surgery a risk. Osteoporosis is a long-term complication of homocystinuria.


Newborn screening of a dried blood spot using tandem mass spectrometry reveals elevated levels of methionine, which should prompt testing plasma for amino acids, including homocysteine. Elevated methionine and homocysteine in plasma indicate CBS deficiency, while an isolated increase in methionine suggests hepatic methionine adenosyltransferase deficiency. Also the Met/Phe ratio has been found informative for HCY. In affected patients, the presence of homocystine in the urine is a consistent finding, especially after early infancy. CBS enzyme activity can be measured in many tissues, including fibroblasts, lymphocytes, liver, amniocytes, and chorionic villi (biopsy or cultured cells). Deficient enzyme activity may be followed with DNA mutation analysis for the several known mutations in the CBS gene.


Treatment of CBS deficiency usually begins with a trial of oral vitamin B6 (pyridoxine) supplementation, with daily measurement of plasma amino acids. CBS requires pyridoxine as a coenzyme for enzymatic activity. Overall, about 25% of patients respond to large doses of pyridoxine, although the percentage may be lower for patients identified through newborn screening. This pyridoxine response usually coincides with the presence of some residual enzyme activity. Dietary restriction of methionine in conjunction with cystine supplementation reverses the biochemical abnormalities to some extent and appears to reduce the clinical symptoms. Special formulas are available commercially, but the diet is difficult to maintain long term. In an attempt to decrease homocysteine levels, folic acid, and betaine can be supplemented to induce recycling of this amino acid to methionine for alternate metabolism. Vitamin B12 (cobalamin) may also be helpful.

Because the diagnosis and therapy of homocystinuria is complex, the pediatrician is advised to manage the patient in close collaboration with a consulting pediatric metabolic disease specialist. It is recommended that parents travel with a letter of treatment guidelines from the patient’s physician.


This disorder most often follows an autosomal recessive inheritance pattern. With recessive disorders affected patients usually have two copies of a disease gene (or mutation) in order to show symptoms. People with only one copy of the disease gene (called carriers) generally do not show signs or symptoms of the condition but can pass the disease gene to their children. When both parents are carriers of the disease gene for a particular disorder, there is a 25% chance with each pregnancy that they will have a child affected with the disorder.


Instruments for Homocystinuria (HCY)

Tandem Mass Spectrometry – QSight®

Tandem Mass Spectrometry – QSight®

The QSight® MD mass spectrometry screening systems are designed for routine high throughput quantitation. They offer expanded screening for a variety of inborn errors of metabolism with a wide analyte panel, and access to Tier 2 chromatography (QSight® 225 MD UHPLC only).

Compatible Kits


NeoBase™ Non-derivatized MSMS kit

NeoBase™ 2 Non-derivatized MSMS kit

Revvity does not endorse or make recommendations with respect to research, medication, or treatments. All information presented is for informational purposes only and is not intended as medical advice. For country specific recommendations please consult your local health care professionals.



Take the next step


Speak with a sales person

Talk to one of our product experts about the right solutions for you.

Contact us today

View more resources

Explore our articles and resources section for the latest information.

Learn More

Read the lastest news

Sign up for our newsletter to find out about the latest news.

Sign up
Spin gif